ENSDARG00000031681


Danio rerio

Features
Gene ID: ENSDARG00000031681
  
Biological name :atp6v0b
  
Synonyms : atp6v0b / ATPase H+ transporting V0 subunit b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 33681199
Gene end: 33687214
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000117925
NCBI entrez gene - 321724     See in Manteia.
RefSeq - NM_199561
RefSeq Peptide - NP_955855
swissprot - F1QYM3
ZFIN ID - ZDB-GENE-030131-443
Ensembl - ENSDARG00000031681
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BX649508.2 / Q91V37* / Q99437* / ATP6V0B* / ATPase H+ transporting V0 subunit b* / ATPase, H+ transporting, lysosomal V0 subunit B*ENSDARG0000011491924


Protein motifs (from Interpro)
Interpro ID Name
 IPR000245  V-ATPase proteolipid subunit
 IPR002379  V-ATPase proteolipid subunit C-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0007035 vacuolar acidification IBA
 biological_processGO:0015991 ATP hydrolysis coupled proton transport IEA
 biological_processGO:0048066 developmental pigmentation IMP
 biological_processGO:0060041 retina development in camera-type eye IMP
 cellular_componentGO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 cellular_componentGO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEA
 cellular_componentGO:0033179 proton-transporting V-type ATPase, V0 domain IEA
 molecular_functionGO:0015078 proton transmembrane transporter activity IEA
 molecular_functionGO:0046961 proton-transporting ATPase activity, rotational mechanism IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye discolored , abnormal
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 ZFA:0000152 retina retina degenerate , abnormal
Show

 ZFA:0000368 integument integument colorless , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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