ENSDARG00000031885


Danio rerio

Features
Gene ID: ENSDARG00000031885
  
Biological name :psmb12
  
Synonyms : proteasome subunit beta 12 / psmb12
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 7115223
Gene end: 7119456
  
Corresponding Affymetrix probe sets: Dr.8210.1.S1_at (Zebrafish Array)   NM_131676_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000001845
NCBI entrez gene - 64279     See in Manteia.
RefSeq - NM_131676
RefSeq Peptide - NP_571751
swissprot - Q9PUS6
ZFIN ID - ZDB-GENE-001208-1
Ensembl - ENSDARG00000031885
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
psmb6 / proteasome subunit beta 6 / P28072* / Q60692* / Proteasome subunit beta type-6 *ENSDARG0000000224050
psmb9a / proteasome subunit beta 9a / PSMB9* / P28065* / proteasome subunit beta 9* / proteasome (prosome, macropain) subunit, beta type 9 (large multifunctional peptidase 2)*ENSDARG0000000065650


Protein motifs (from Interpro)
Interpro ID Name
 IPR000243  Peptidase T1A, proteasome beta-subunit
 IPR001353  Proteasome, subunit alpha/beta
 IPR016050  Proteasome beta-type subunit, conserved site
 IPR023333  Proteasome B-type subunit
 IPR029055  Nucleophile aminohydrolases, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0051603 proteolysis involved in cellular protein catabolic process IEA
 cellular_componentGO:0000502 proteasome complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005839 proteasome core complex IEA
 molecular_functionGO:0004175 endopeptidase activity IEA
 molecular_functionGO:0004298 threonine-type endopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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