ENSDARG00000032623


Danio rerio

Features
Gene ID: ENSDARG00000032623
  
Biological name :rcan3
  
Synonyms : rcan3 / regulator of calcineurin 3
  
Possible biological names infered from orthology : Calcipressin-3 / Q9JKK0 / Q9UKA8 / RCAN family member 3
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 26879725
Gene end: 26926577
  
Corresponding Affymetrix probe sets: Dr.1817.1.A1_at (Zebrafish Array)   NM_001005392_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000045841
Ensembl peptide - ENSDARP00000050201
NCBI entrez gene - 325356     See in Manteia.
RefSeq - XM_005158490
RefSeq - NM_001005392
RefSeq Peptide - NP_001005392
swissprot - Q6DG39
swissprot - Q5CZS1
ZFIN ID - ZDB-GENE-040718-445
Ensembl - ENSDARG00000032623
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RCAN3ENSGALG00000004282Gallus gallus
 RCAN3ENSG00000117602Homo sapiens
 Rcan3ENSMUSG00000059713Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rcan2 / regulator of calcineurin 2 / Q14206* / Q9JHG2*ENSDARG0000002186960
rcan1a / regulator of calcineurin 1a / RCAN1* / Q9JHG6* / P53805* / regulator of calcineurin 1*ENSDARG0000000310945


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR006931  Calcipressin
 IPR034923  Calcipressin-3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019722 calcium-mediated signaling IEA
 biological_processGO:0043666 regulation of phosphoprotein phosphatase activity IEA
 biological_processGO:0070884 regulation of calcineurin-NFAT signaling cascade IBA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr