ENSDARG00000032651


Danio rerio

Features
Gene ID: ENSDARG00000032651
  
Biological name :ppp1r10
  
Synonyms : ppp1r10 / protein phosphatase 1, regulatory subunit 10
  
Possible biological names infered from orthology : Q80W00 / Q96QC0 / Serine/threonine-protein phosphatase 1 regulatory subunit 10
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 30408317
Gene end: 30422239
  
Corresponding Affymetrix probe sets: Dr.6364.1.S1_a_at (Zebrafish Array)   Dr.6364.1.S2_at (Zebrafish Array)   NM_212568_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000151082
Ensembl peptide - ENSDARP00000043553
Ensembl peptide - ENSDARP00000112783
Ensembl peptide - ENSDARP00000120235
NCBI entrez gene - 192329     See in Manteia.
RefSeq - NM_001277109
RefSeq - NM_212568
RefSeq - XM_021467979
RefSeq Peptide - NP_001264038
RefSeq Peptide - NP_997733
swissprot - A3KPX4
ZFIN ID - ZDB-GENE-020419-15
Ensembl - ENSDARG00000032651
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q96QC0ENSG00000204569Homo sapiens
 Q80W00ENSMUSG00000039220Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR003617  Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
 IPR017923  Transcription factor IIS, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr