ENSDARG00000034600


Danio rerio

Features
Gene ID: ENSDARG00000034600
  
Biological name :tmem165
  
Synonyms : tmem165 / transmembrane protein 165
  
Possible biological names infered from orthology : P52875 / Q9HC07
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 22186297
Gene end: 22193190
  
Corresponding Affymetrix probe sets: Dr.2671.1.S1_at (Zebrafish Array)   Dr.2671.2.A1_at (Zebrafish Array)   NM_212683_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000047623
NCBI entrez gene - 324501     See in Manteia.
RefSeq - NM_212683
RefSeq Peptide - NP_997848
swissprot - Q8JJ62
ZFIN ID - ZDB-GENE-030131-3222
Ensembl - ENSDARG00000034600
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMEM165ENSGALG00000027886Gallus gallus
 Q9HC07ENSG00000134851Homo sapiens
 P52875ENSMUSG00000029234Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001727  Gdt1 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001649 osteoblast differentiation IMP
 biological_processGO:0002062 chondrocyte differentiation IMP
 biological_processGO:0006487 protein N-linked glycosylation IMP
 biological_processGO:0048703 embryonic viscerocranium morphogenesis IMP
 biological_processGO:0051216 cartilage development IMP
 biological_processGO:0060536 cartilage morphogenesis IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased length , abnormal
Show

 ZFA:0001205 Meckel s cartilage Meckels cartilage shape , abnormal
Meckels cartilage cell decreased amount , abnormal
Show

 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton truncated , abnormal
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 ZFA:0001399 palatoquadrate cartilage palatoquadrate cartilage cell decreased amount , abnormal
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 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage position , abnormal
ceratohyal cartilage increased angle to ceratohyal cartilage , abnormal
ceratohyal cartilage cell decreased amount , abnormal
Show

 ZFA:0009084 chondrocyte chondrocyte decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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