ENSDARG00000034773


Danio rerio

Features
Gene ID: ENSDARG00000034773
  
Biological name :ncapd3
  
Synonyms : ncapd3 / non-SMC condensin II complex, subunit D3
  
Possible biological names infered from orthology : P42695
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 21540453
Gene end: 21563040
  
Corresponding Affymetrix probe sets: Dr.9196.1.S1_at (Zebrafish Array)   NM_200330_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000049571
NCBI entrez gene - 556493     See in Manteia.
RefSeq - NM_200330
RefSeq Peptide - NP_956624
swissprot - F1R935
ZFIN ID - ZDB-GENE-040426-737
Ensembl - ENSDARG00000034773
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000037373Gallus gallus
 ENSGALG00000001491Gallus gallus
 NCAPD3ENSG00000151503Homo sapiens
 Ncapd3ENSMUSG00000035024Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR012371  Condensin-2 complex subunit D3
 IPR016024  Armadillo-type fold
 IPR026971  Condensin subunit 1/Condensin-2 complex subunit D3
 IPR032682  Condensin complex subunit 1, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007076 mitotic chromosome condensation IEA
 biological_processGO:0010032 meiotic chromosome condensation IBA
 biological_processGO:0051304 chromosome separation IBA
 cellular_componentGO:0000779 condensed chromosome, centromeric region IBA
 cellular_componentGO:0000799 nuclear condensin complex IEA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0042393 histone binding IBA


Pathways (from Reactome)
Pathway description
Condensation of Prophase Chromosomes


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr