ENSDARG00000036038


Danio rerio

Features
Gene ID: ENSDARG00000036038
  
Biological name :harbi1
  
Synonyms : harbi1 / harbinger transposase derived 1 / Q6AZB8
  
Possible biological names infered from orthology : Mus musculus harbinger transposase derived 1 (Harbi1), transcript variant 3, mRNA. / Q8BR93 / Q96MB7
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 38808027
Gene end: 38810706
  
Corresponding Affymetrix probe sets: Dr.15651.1.A1_at (Zebrafish Array)   Dr.15651.2.S1_at (Zebrafish Array)   NM_001003734_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000052322
Ensembl peptide - ENSDARP00000145132
NCBI entrez gene - 445279     See in Manteia.
RefSeq - NM_001003734
RefSeq Peptide - NP_001003734
swissprot - Q6AZB8
ZFIN ID - ZDB-GENE-040608-1
Ensembl - ENSDARG00000036038
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HARBI1ENSGALG00000008354Gallus gallus
 HARBI1ENSG00000180423Homo sapiens
 Harbi1ENSMUSG00000027243Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:162945ENSDARG0000002881530
si:dkey-197c15.6ENSDARG0000007940125
zmp:0000000634ENSDARG0000005228823
BX901974.1ENSDARG0000006759223
CR749167.2ENSDARG0000010852522
zgc:113227ENSDARG0000005887422
CABZ01085658.1ENSDARG0000009054420
zgc:194221ENSDARG0000003968719
si:dkey-121j17.6ENSDARG0000006966117
si:dkey-228l14.1ENSDARG0000006979917
si:ch211-133l5.8ENSDARG0000002767611
si:dkeyp-73g8.5ENSDARG000000944428


Protein motifs (from Interpro)
Interpro ID Name
 IPR026103  Harbinger transposase-derived nuclease, animal
 IPR027806  Harbinger transposase-derived nuclease domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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