ENSDARG00000036888


Danio rerio

Features
Gene ID: ENSDARG00000036888
  
Biological name :zgc:153935
  
Synonyms : zgc:153935
  
Possible biological names infered from orthology : 1810030O07Rik / chromosome X open reading frame 38 / CXorf38 / Q8C5K5 / Q8TB03
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 27714932
Gene end: 27735763
  
Corresponding Affymetrix probe sets: Dr.2613.1.A1_at (Zebrafish Array)   NM_001077719_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000114265
Ensembl peptide - ENSDARP00000146474
Ensembl peptide - ENSDARP00000120319
Ensembl peptide - ENSDARP00000114564
Ensembl peptide - ENSDARP00000114405
NCBI entrez gene - 777611     See in Manteia.
RefSeq - NM_001077719
RefSeq Peptide - NP_001071187
swissprot - A0JML0
swissprot - A0A0J9YIW1
swissprot - F1QCB8
swissprot - E9QFK4
swissprot - E9QF13
ZFIN ID - ZDB-GENE-061103-148
Ensembl - ENSDARG00000036888
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8TB03ENSG00000185753Homo sapiens
 Q8C5K5ENSMUSG00000044148Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-91p5.3 / Q8TB03* / Q8C5K5* / CXorf38* / 1810030O07Rik* / Uncharacterized * / chromosome X open reading frame 38*ENSDARG0000008922723


Protein motifs (from Interpro)
Interpro ID Name
 IPR027897  Protein of unknown function DUF4559
 IPR033516  CARD8/ASC/NALP1, CARD domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006954 inflammatory response IEA
 biological_processGO:0045087 innate immune response IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr