ENSDARG00000037350


Danio rerio

Features
Gene ID: ENSDARG00000037350
  
Biological name :rpl9
  
Synonyms : ribosomal protein L9 / rpl9
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 23269503
Gene end: 23274504
  
Corresponding Affymetrix probe sets: Dr.1202.3.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000054337
Ensembl peptide - ENSDARP00000054339
Ensembl peptide - ENSDARP00000109653
Ensembl peptide - ENSDARP00000121649
NCBI entrez gene - 336702     See in Manteia.
RefSeq - XM_005170906
RefSeq Peptide - NP_001003861
swissprot - Q6DRM3
swissprot - Q5BKV9
ZFIN ID - ZDB-GENE-030131-8646
Ensembl - ENSDARG00000037350
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CR759875.5 / RPL9* / P32969* / ribosomal protein L9*ENSDARG0000011693917


Protein motifs (from Interpro)
Interpro ID Name
 IPR000702  Ribosomal protein L6
 IPR002359  Ribosomal protein L6, conserved site-2
 IPR020040  Ribosomal protein L6, alpha-beta domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0019843 rRNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr