ENSDARG00000037517


Danio rerio

Features
Gene ID: ENSDARG00000037517
  
Biological name :slc35c2
  
Synonyms : slc35c2 / solute carrier family 35 (GDP-fucose transporter), member C2
  
Possible biological names infered from orthology : Q8VCX2 / Q9NQQ7 / solute carrier family 35 member C2
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 20431140
Gene end: 20511954
  
Corresponding Affymetrix probe sets: Dr.7973.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000113029
Ensembl peptide - ENSDARP00000157391
Ensembl peptide - ENSDARP00000120995
Ensembl peptide - ENSDARP00000093738
Ensembl peptide - ENSDARP00000104003
NCBI entrez gene - 323482     See in Manteia.
swissprot - E9QI71
swissprot - E7EXF3
swissprot - F1Q5U3
swissprot - F1R7R7
ZFIN ID - ZDB-GENE-030131-2202
Ensembl - ENSDARG00000037517
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC35C2ENSGALG00000020939Gallus gallus
 Q9NQQ7ENSG00000080189Homo sapiens
 Q8VCX2ENSMUSG00000017664Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001791  Laminin G domain
 IPR002035  von Willebrand factor, type A
 IPR003961  Fibronectin type III
 IPR004853  Sugar phosphate transporter domain
 IPR008160  Collagen triple helix repeat
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015786 UDP-glucose transmembrane transport IBA
 cellular_componentGO:0005793 endoplasmic reticulum-Golgi intermediate compartment IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr