ENSDARG00000037551


Danio rerio

Features
Gene ID: ENSDARG00000037551
  
Biological name :pm20d1.1
  
Synonyms : peptidase M20 domain containing 1, tandem duplicate 1 / pm20d1.1
  
Possible biological names infered from orthology : Mus musculus peptidase M20 domain containing 1 (Pm20d1), transcript variant 2, mRNA. / peptidase M20 domain containing 1 / PM20D1 / Q6GTS8 / Q8C165
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 18020928
Gene end: 18030399
  
Corresponding Affymetrix probe sets: Dr.14461.1.A1_at (Zebrafish Array)   NM_001037371_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000114349
Ensembl peptide - ENSDARP00000117592
NCBI entrez gene - 553216     See in Manteia.
RefSeq - NM_001037371
RefSeq Peptide - NP_001032448
swissprot - F1QIR5
swissprot - E9QES0
ZFIN ID - ZDB-GENE-051120-102
Ensembl - ENSDARG00000037551
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PM20D1ENSGALG00000000724Gallus gallus
 PM20D1ENSG00000162877Homo sapiens
 Pm20d1ENSMUSG00000042251Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q08BB2 / pm20d1.2 / peptidase M20 domain containing 1, tandem duplicate 2 / Q8C165* / PM20D1* / Q6GTS8* / peptidase M20 domain containing 1* / Mus musculus peptidase M20 domain containing 1...ENSDARG0000006209675
acy1 / aminoacylase 1 / Q03154* / ABHD14A-ACY1* / ABHD14A-ACY1 readthrough*ENSDARG0000011112917
acy1 / aminoacylase 1 / Q03154* / ABHD14A-ACY1* / ABHD14A-ACY1 readthrough*ENSDARG0000003847517


Protein motifs (from Interpro)
Interpro ID Name
 IPR002933  Peptidase M20
 IPR011650  Peptidase M20, dimerisation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008152 metabolic process IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr