ENSDARG00000038074


Danio rerio

Features
Gene ID: ENSDARG00000038074
  
Biological name :ergic3
  
Synonyms : ergic3 / ERGIC and golgi 3 / Q803I2
  
Possible biological names infered from orthology : Mus musculus ERGIC and golgi 3 (Ergic3), transcript variant 2, mRNA. / Q9CQE7 / Q9Y282
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 50393047
Gene end: 50414197
  
Corresponding Affymetrix probe sets: Dr.504.1.S1_at (Zebrafish Array)   NM_001033105_at (Zebrafish Genome Array with custom cdf files)   NM_201015_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000055510
Ensembl peptide - ENSDARP00000055501
NCBI entrez gene - 393990     See in Manteia.
RefSeq - NM_201015
RefSeq - NM_001033105
RefSeq Peptide - NP_001028277
RefSeq Peptide - NP_957309
swissprot - B2GQE2
swissprot - Q803I2
ZFIN ID - ZDB-GENE-040426-795
Ensembl - ENSDARG00000038074
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ERGIC3ENSGALG00000027834Gallus gallus
 ERGIC3ENSG00000125991Homo sapiens
 Ergic3ENSMUSG00000005881Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q7T2D4 / ergic2 / ERGIC and golgi 2 / Q96RQ1* / Q9CR89* / Endoplasmic reticulum-Golgi intermediate compartment protein 2 *ENSDARG0000005193627
ergic1 / endoplasmic reticulum-golgi intermediate compartment 1 / Q969X5* / Q9DC16* / Endoplasmic reticulum-Golgi intermediate compartment protein 1 *ENSDARG0000010004726
si:ch211-225b10.3 / Q9CR89* / ERGIC2* / Q96RQ1* / ERGIC and golgi 2* / Endoplasmic reticulum-Golgi intermediate compartment protein 2 *ENSDARG0000002022425


Protein motifs (from Interpro)
Interpro ID Name
 IPR012936  Endoplasmic reticulum vesicle transporter, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016192 vesicle-mediated transport IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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