ENSDARG00000038222


Danio rerio

Features
Gene ID: ENSDARG00000038222
  
Biological name :tyw3
  
Synonyms : Q6DHJ1 / tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) / tyw3
  
Possible biological names infered from orthology : Q6IPR3 / Q8BSA9 / tRNA-yW synthesizing protein 3 homolog
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 11119315
Gene end: 11126221
  
Corresponding Affymetrix probe sets: Dr.16609.1.A1_at (Zebrafish Array)   Dr.16609.2.A1_at (Zebrafish Array)   NM_001002611_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000055736
NCBI entrez gene - 436884     See in Manteia.
RefSeq - XM_005171159
RefSeq - NM_001002611
RefSeq Peptide - NP_001002611
swissprot - Q6DHJ1
ZFIN ID - ZDB-GENE-040718-355
Ensembl - ENSDARG00000038222
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TYW3ENSGALG00000032549Gallus gallus
 TYW3ENSG00000162623Homo sapiens
 Tyw3ENSMUSG00000047583Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003827  tRNA wybutosine-synthesizing protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0032259 methylation IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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