ENSDARG00000038271


Danio rerio

Features
Gene ID: ENSDARG00000038271
  
Biological name :zgc:113293
  
Synonyms : zgc:113293
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 205763
Gene end: 211064
  
Corresponding Affymetrix probe sets: Dr.14839.1.S1_at (Zebrafish Array)   NM_001017894_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000091845
Ensembl peptide - ENSDARP00000139255
NCBI entrez gene - 550593     See in Manteia.
RefSeq - NM_001017894
RefSeq Peptide - NP_001017894
swissprot - F1QGB7
swissprot - A0A0R4IWF6
ZFIN ID - ZDB-GENE-050417-453
Ensembl - ENSDARG00000038271
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BX664625.1ENSDARG0000004313138
si:dkey-102c8.2 / si:ch211-222k6.3ENSDARG0000007157837
BX664625.2ENSDARG0000008744434
si:dkey-102c8.2ENSDARG0000005853733
si:dkey-102c8.2ENSDARG0000011236132
zgc:171686ENSDARG0000007672132
si:dkey-102c8.3ENSDARG0000011357232
si:ch211-236g6.1ENSDARG0000007159031
si:dkey-253d23.3ENSDARG0000009564330
si:dkey-253d23.4ENSDARG0000007976229
BX664625.4ENSDARG0000010330927
si:ch1073-214b20.2ENSDARG0000006095327
AL831726.2ENSDARG0000010418527
CABZ01117603.1ENSDARG0000010093926
BX539307.1ENSDARG0000007158824


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013151  Immunoglobulin
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006955 immune response IBA
 cellular_componentGO:0009986 cell surface IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005102 signaling receptor binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr