ENSDARG00000038432


Danio rerio

Features
Gene ID: ENSDARG00000038432
  
Biological name :actr10
  
Synonyms : actr10 / ARP10 actin related protein 10 homolog
  
Possible biological names infered from orthology : Actin-related protein 10 / actin related protein 10 homolog / Q9NZ32 / Q9QZB7
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 54274431
Gene end: 54286860
  
Corresponding Affymetrix probe sets: Dr.13510.1.S1_at (Zebrafish Array)   NM_200170_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000126272
Ensembl peptide - ENSDARP00000090111
NCBI entrez gene - 393139     See in Manteia.
RefSeq - NM_200170
RefSeq Peptide - NP_956464
swissprot - I3ITK2
swissprot - F1R008
ZFIN ID - ZDB-GENE-040426-768
Ensembl - ENSDARG00000038432
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000012085Gallus gallus
 ACTR10ENSGALG00000012041Gallus gallus
 ACTR10ENSG00000131966Homo sapiens
 Actr10ENSMUSG00000021076Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004000  Actin family
 IPR027127  Actin-related protein 10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0098958 retrograde axonal transport of mitochondrion IMP
 cellular_componentGO:1904115 axon cytoplasm IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain decreased amount , abnormal
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 ZFA:0000075 spinal cord spinal cord central nervous system myelination decreased occurrence , abnormal
spinal cord axon swollen , abnormal
spinal cord decreased amount , abnormal
spinal cord has fewer parts of type spinal cord glioblast, abnormal
spinal cord mitotic cell cycle decreased rate , abnormal
spinal cord oligodendrocyte progenitor proliferation decreased rate , abnormal
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 ZFA:0000175 posterior lateral line nerve posterior lateral line nerve axon terminus swollen , abnormal
posterior lateral line nerve anterograde axonal transport decreased process quality , abnormal
posterior lateral line nerve axon terminus increased amount , abnormal
posterior lateral line nerve retrograde axonal transport of mitochondrion decreased occurrence , abnormal
posterior lateral line nerve mitochondrion mislocalised , abnormal
posterior lateral line nerve axon terminus has extra parts of type posterior lateral line nerve mitochondrion, abnormal
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 ZFA:0000940 posterior lateral line neuromast posterior lateral line neuromast axon terminus swollen , abnormal
posterior lateral line neuromast axon terminus increased amount , abnormal
posterior lateral line neuromast axon terminus has extra parts of type posterior lateral line neuromast mitochondrion, abnormal
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 ZFA:0000944 posterior lateral line posterior lateral line axon swollen , abnormal
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 ZFA:0009076 oligodendrocyte oligodendrocyte glial cell projection decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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