ENSDARG00000038567


Danio rerio

Features
Gene ID: ENSDARG00000038567
  
Biological name :tsr3
  
Synonyms : tsr3 / TSR3, 20S rRNA accumulation, homolog (S. cerevisiae)
  
Possible biological names infered from orthology : Q5HZH2 / Q9UJK0 / Ribosome biosis / TSR3, acp transferase ribosome maturation factor
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 37329119
Gene end: 37338739
  
Corresponding Affymetrix probe sets: Dr.18499.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000056302
Ensembl peptide - ENSDARP00000122937
swissprot - E9QJ86
swissprot - F1QYS3
ZFIN ID - ZDB-GENE-040718-63
Ensembl - ENSDARG00000038567
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TSR3ENSGALG00000006434Gallus gallus
 TSR3ENSG00000007520Homo sapiens
 Tsr3ENSMUSG00000015126Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001487  Bromodomain
 IPR007177  Ribosome biogenesis protein, C-terminal
 IPR007209  RNase L inhibitor RLI, possible metal-binding domain
 IPR016024  Armadillo-type fold
 IPR022968  Ribosome biogenesis protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0030490 maturation of SSU-rRNA IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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