ENSDARG00000038787


Danio rerio

Features
Gene ID: ENSDARG00000038787
  
Biological name :tmub1
  
Synonyms : Q6P135 / tmub1 / transmembrane and ubiquitin-like domain containing 1
  
Possible biological names infered from orthology : Q9BVT8 / Q9JMG3 / Transmembrane and ubiquitin-like domain-containing protein 1 iHOPS
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 32561183
Gene end: 32574944
  
Corresponding Affymetrix probe sets: Dr.1249.1.A1_at (Zebrafish Array)   NM_213298_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000056641
NCBI entrez gene - 406589     See in Manteia.
RefSeq - NM_213298
RefSeq Peptide - NP_998463
swissprot - Q6P135
ZFIN ID - ZDB-GENE-040426-2504
Ensembl - ENSDARG00000038787
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMUB1ENSGALG00000036361Gallus gallus
 TMUB1ENSG00000164897Homo sapiens
 Tmub1ENSMUSG00000028958Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tmub2 / transmembrane and ubiquitin-like domain containing 2 / Q71RG4*ENSDARG0000005646739


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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