ENSDARG00000038822


Danio rerio

Features
Gene ID: ENSDARG00000038822
  
Biological name :mrc1b
  
Synonyms : mannose receptor, C type 1b / mrc1b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 31515853
Gene end: 31540922
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000114478
Ensembl peptide - ENSDARP00000116028
Ensembl peptide - ENSDARP00000056685
NCBI entrez gene - 559502     See in Manteia.
RefSeq - NM_001310844
RefSeq Peptide - NP_001297773
swissprot - F1QYF2
swissprot - F1QJH2
swissprot - F1R732
ZFIN ID - ZDB-GENE-070705-13
Ensembl - ENSDARG00000038822
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mrc1a / mannose receptor, C type 1a / MRC1* / P22897* / mannose receptor C-type 1*ENSDARG0000010210043
mrc2 / mannose receptor, C type 2 / Q9UBG0*ENSDARG0000007813528
pla2r1 / phospholipase A2 receptor 1 / Q13018* / Q62028* / Secretory phospholipase A2 receptor Soluble secretory phospholipase A2 receptor*ENSDARG0000007747426
ly75 / lymphocyte antigen 75 / Q60767* / O60449* / LY75-CD302* / LY75-CD302 readthrough*ENSDARG0000005311323


Protein motifs (from Interpro)
Interpro ID Name
 IPR000562  Fibronectin type II domain
 IPR000772  Ricin B, lectin domain
 IPR001304  C-type lectin-like
 IPR013806  Kringle-like fold
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004888 transmembrane signaling receptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr