ENSDARG00000038847


Danio rerio

Features
Gene ID: ENSDARG00000038847
  
Biological name :gins3
  
Synonyms : gins3 / GINS complex subunit 3
  
Possible biological names infered from orthology : DNA replication complex GINS protein PSF3 / Q9BRX5 / Q9CY94
  
Species: Danio rerio
  
Chr. number: 25
Strand: -1
Band:
Gene start: 13399967
Gene end: 13408760
  
Corresponding Affymetrix probe sets: Dr.13962.1.S1_at (Zebrafish Array)   NM_001002874_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000056722
Ensembl peptide - ENSDARP00000129840
NCBI entrez gene - 442931     See in Manteia.
RefSeq - NM_001002874
RefSeq Peptide - NP_001002874
swissprot - F1QXM4
swissprot - X1WHX5
ZFIN ID - ZDB-GENE-040721-1
Ensembl - ENSDARG00000038847
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GINS3ENSGALG00000031209Gallus gallus
 GINS3ENSG00000181938Homo sapiens
 Gins3ENSMUSG00000031669Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR010492  GINS complex, subunit Psf3
 IPR021151  GINS subunit, domain A


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006260 DNA replication IEA
 biological_processGO:0007507 heart development IMP
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
Unwinding of DNA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000084 yolk yolk circular , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
gut quality , abnormal
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 ZFA:0000123 liver liver hypoplastic , abnormal
liver quality , abnormal
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 ZFA:0001114 head head flat , abnormal
head decreased width , abnormal
head decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr