ENSDARG00000039352


Danio rerio

Features
Gene ID: ENSDARG00000039352
  
Biological name :pald1b
  
Synonyms : pald1b / phosphatase domain containing, paladin 1b
  
Possible biological names infered from orthology : PALD1 / phosphatase domain containing, paladin 1 / Q9ULE6
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 30169233
Gene end: 30214368
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133910
Ensembl peptide - ENSDARP00000157186
Ensembl peptide - ENSDARP00000152165
Ensembl peptide - ENSDARP00000118252
Ensembl peptide - ENSDARP00000120616
NCBI entrez gene - 560385     See in Manteia.
RefSeq - NM_001089385
RefSeq - XM_021480595
RefSeq Peptide - NP_001082854
swissprot - B7ZD37
swissprot - B7ZD36
ZFIN ID - ZDB-GENE-070424-88
Ensembl - ENSDARG00000039352
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PALD1ENSGALG00000004465Gallus gallus
 PALD1ENSG00000107719Homo sapiens
 Pald1ENSMUSG00000020092Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pald1a / phosphatase domain containing, paladin 1a / PALD1* / Q9ULE6* / phosphatase domain containing, paladin 1*ENSDARG0000009894661


Protein motifs (from Interpro)
Interpro ID Name
 IPR029021  Protein-tyrosine phosphatase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006470 protein dephosphorylation IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0004722 protein serine/threonine phosphatase activity IBA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IBA
 molecular_functionGO:0008138 protein tyrosine/serine/threonine phosphatase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000099 brain vasculature brain vasculature increased permeability , abnormal
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 ZFA:0005020 central artery central artery decreased branchiness , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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