ENSDARG00000040254


Danio rerio

Features
Gene ID: ENSDARG00000040254
  
Biological name :hormad1
  
Synonyms : A2BF66 / hormad1 / HORMA domain containing 1
  
Possible biological names infered from orthology : HORMA domain-containing protein 1 / Q86X24 / Q9D5T7
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 29551023
Gene end: 29557338
  
Corresponding Affymetrix probe sets: Dr.15549.1.S1_at (Zebrafish Array)   NM_001002357_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000058887
NCBI entrez gene - 436630     See in Manteia.
RefSeq - NM_001002357
RefSeq Peptide - NP_001002357
swissprot - A2BF66
ZFIN ID - ZDB-GENE-040718-49
Ensembl - ENSDARG00000040254
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HORMAD1ENSGALG00000043021Gallus gallus
 Q86X24ENSG00000143452Homo sapiens
 Q9D5T7ENSMUSG00000028109Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zte38 / zebrafish testis-expressed 38ENSDARG0000003705631


Protein motifs (from Interpro)
Interpro ID Name
 IPR003511  HORMA domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007130 synaptonemal complex assembly ISS
 biological_processGO:0007283 spermatogenesis ISS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0042138 meiotic DNA double-strand break formation ISS
 biological_processGO:0048477 oogenesis ISS
 biological_processGO:0051177 meiotic sister chromatid cohesion ISS
 biological_processGO:0051321 meiotic cell cycle ISS
 biological_processGO:0051598 meiotic recombination checkpoint ISS
 biological_processGO:0060629 regulation of homologous chromosome segregation ISS
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005694 chromosome ISS
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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