ENSDARG00000040607


Danio rerio

Features
Gene ID: ENSDARG00000040607
  
Biological name :rtf2
  
Synonyms : replication termination factor 2 domain containing 1 / rtf2
  
Possible biological names infered from orthology : Q99K95 / Q9BY42 / replication termination factor 2
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 56076595
Gene end: 56140968
  
Corresponding Affymetrix probe sets: Dr.15695.1.S1_at (Zebrafish Array)   NM_199742_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000059437
Ensembl peptide - ENSDARP00000128839
Ensembl peptide - ENSDARP00000139044
NCBI entrez gene - 326100     See in Manteia.
RefSeq - NM_199742
RefSeq Peptide - NP_956036
swissprot - F1QSV2
swissprot - A0A0R4IT16
swissprot - X1WF35
ZFIN ID - ZDB-GENE-030131-4825
Ensembl - ENSDARG00000040607
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RTFDC1ENSGALG00000007709Gallus gallus
 RTF2ENSG00000022277Homo sapiens
 Rtf2ENSMUSG00000027502Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006735  Replication termination factor 2
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR027799  Replication termination factor 2, RING-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0071171 site-specific DNA replication termination at RTS1 barrier IBA
 biological_processGO:1902979 mitotic DNA replication termination IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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