ENSDARG00000040666


Danio rerio

Features
Gene ID: ENSDARG00000040666
  
Biological name :nifk
  
Synonyms : nifk / nucleolar protein interacting with the FHA domain of MKI67 / Q8JIY8
  
Possible biological names infered from orthology : MKI67 FHA domain-interacting nucleolar phosphoprotein / Q91VE6 / Q9BYG3
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 38158570
Gene end: 38162095
  
Corresponding Affymetrix probe sets: Dr.4123.1.S1_at (Zebrafish Array)   NM_173288_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000059548
Ensembl peptide - ENSDARP00000114443
NCBI entrez gene - 317644     See in Manteia.
RefSeq - NM_173288
RefSeq Peptide - NP_775395
swissprot - F6NUT2
swissprot - Q8JIY8
ZFIN ID - ZDB-GENE-021231-4
Ensembl - ENSDARG00000040666
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NIFKENSGALG00000011650Gallus gallus
 NIFKENSG00000155438Homo sapiens
 NifkENSMUSG00000026377Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR021043  MKI67 FHA domain-interacting nucleolar phosphoprotein, FHA Ki67 binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000012 central nervous system central nervous system necrotic , abnormal
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 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary condensed , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000110 fourth ventricle fourth ventricle distended , abnormal
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 ZFA:0000112 gut gut hypoplastic , abnormal
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 ZFA:0000123 liver liver hypoplastic , abnormal
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 ZFA:0001094 whole organism whole organism viability , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk decreased thickness , abnormal
trunk necrotic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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