ENSDARG00000040861


Danio rerio

Features
Gene ID: ENSDARG00000040861
  
Biological name :tcf25
  
Synonyms : tcf25 / transcription factor 25 (basic helix-loop-helix)
  
Possible biological names infered from orthology : Q8R3L2 / Q9BQ70 / transcription factor 25
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 31117136
Gene end: 31206658
  
Corresponding Affymetrix probe sets: Dr.1663.1.A1_at (Zebrafish Array)   Dr.17219.1.S1_at (Zebrafish Array)   NM_001005399_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000059892
Ensembl peptide - ENSDARP00000119333
NCBI entrez gene - 445817     See in Manteia.
RefSeq - NM_001005399
RefSeq Peptide - NP_001005399
swissprot - F6PD58
swissprot - Q1L887
ZFIN ID - ZDB-GENE-040905-2
Ensembl - ENSDARG00000040861
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TCF25ENSGALG00000000129Gallus gallus
 TCF25ENSG00000141002Homo sapiens
 Tcf25ENSMUSG00000001472Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006994  Transcription factor 25
 IPR011990  Tetratricopeptide-like helical domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr