ENSDARG00000041493


Danio rerio

Features
Gene ID: ENSDARG00000041493
  
Biological name :ipo4
  
Synonyms : importin 4 / ipo4
  
Possible biological names infered from orthology : Q8TEX9 / Q8VI75
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 12754013
Gene end: 12832499
  
Corresponding Affymetrix probe sets: Dr.15165.1.S1_at (Zebrafish Array)   Dr.15165.2.A1_at (Zebrafish Array)   XM_679071_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000039155
Ensembl peptide - ENSDARP00000060825
Ensembl peptide - ENSDARP00000156982
NCBI entrez gene - 553305     See in Manteia.
RefSeq - XM_679071
swissprot - F1QIP3
swissprot - F1R750
ZFIN ID - ZDB-GENE-041014-307
Ensembl - ENSDARG00000041493
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 IPO4ENSG00000196497Homo sapiens
 Ipo4ENSMUSG00000002319Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000357  HEAT repeat
 IPR001494  Importin-beta, N-terminal domain
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR021133  HEAT, type 2
 IPR034085  TOG domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000060 protein import into nucleus, translocation IBA
 biological_processGO:0006607 NLS-bearing protein import into nucleus IBA
 biological_processGO:0006610 ribosomal protein import into nucleus IBA
 biological_processGO:0006886 intracellular protein transport IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0031965 nuclear membrane IBA
 cellular_componentGO:0034399 nuclear periphery IBA
 molecular_functionGO:0008139 nuclear localization sequence binding IBA
 molecular_functionGO:0008536 Ran GTPase binding IEA
 molecular_functionGO:0008565 protein transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr