ENSDARG00000041703


Danio rerio

Features
Gene ID: ENSDARG00000041703
  
Biological name :rrbp1b
  
Synonyms : ribosome binding protein 1b / rrbp1b
  
Possible biological names infered from orthology : Q99PL5 / Q9P2E9 / ribosome binding protein 1 / RRBP1
  
Species: Danio rerio
  
Chr. number: 22
Strand: 1
Band:
Gene start: 25086567
Gene end: 25137256
  
Corresponding Affymetrix probe sets: Dr.3421.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000147494
Ensembl peptide - ENSDARP00000156194
Ensembl peptide - ENSDARP00000154666
Ensembl peptide - ENSDARP00000061116
Ensembl peptide - ENSDARP00000133183
Ensembl peptide - ENSDARP00000144223
NCBI entrez gene - 567029     See in Manteia.
RefSeq - NM_199431
RefSeq - XM_005174040
RefSeq - XM_005174041
RefSeq Peptide - NP_955463
swissprot - A0A286YB68
swissprot - A0A0R4IGW7
swissprot - Q1LXR3
ZFIN ID - ZDB-GENE-030429-36
Ensembl - ENSDARG00000041703
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RRBP1ENSGALG00000008676Gallus gallus
 RRBP1ENSG00000125844Homo sapiens
 Rrbp1ENSMUSG00000027422Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rrbp1a / ribosome binding protein 1a / RRBP1* / Q99PL5* / Q9P2E9* / ribosome binding protein 1*ENSDARG0000001376342
ktn1 / kinectin 1 / Q86UP2*ENSDARG0000003280226


Protein motifs (from Interpro)
Interpro ID Name
 IPR007794  Ribosome receptor lysine/proline rich


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IBA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005840 ribosome IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr