ENSDARG00000041811


Danio rerio

Features
Gene ID: ENSDARG00000041811
  
Biological name :rps25
  
Synonyms : Q6PBI5 / ribosomal protein S25 / rps25
  
Possible biological names infered from orthology : P62851 / P62852
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 39125637
Gene end: 39130935
  
Corresponding Affymetrix probe sets: Dr.1334.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000061273
Ensembl peptide - ENSDARP00000124711
NCBI entrez gene - 393788     See in Manteia.
swissprot - G1K2N0
swissprot - Q6PBI5
ZFIN ID - ZDB-GENE-040426-1788
Ensembl - ENSDARG00000041811
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPS25ENSGALG00000007699Gallus gallus
 RPS25ENSG00000118181Homo sapiens
 Rps25ENSMUSG00000009927Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004977  Ribosomal protein S25
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005840 ribosome IEA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
SRP-dependent cotranslational protein targeting to membrane
Major pathway of rRNA processing in the nucleolus and cytosol
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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