ENSDARG00000041835


Danio rerio

Features
Gene ID: ENSDARG00000041835
  
Biological name :ccl38a.5
  
Synonyms : ccl38a.5 / chemokine (C-C motif) ligand 38, duplicate 5
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 38279523
Gene end: 38280392
  
Corresponding Affymetrix probe sets: Dr.15125.1.A1_at (Zebrafish Array)   NM_001030173_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000061310
NCBI entrez gene - 563208     See in Manteia.
RefSeq - NM_001030173
RefSeq Peptide - NP_001025344
swissprot - Q5TYQ0
ZFIN ID - ZDB-GENE-041014-167
Ensembl - ENSDARG00000041835
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccl38.1 / chemokine (C-C motif) ligand 38, duplicate 1ENSDARG0000004191978
ccl38.1 / ccl38.6 / chemokine (C-C motif) ligand 38, duplicate 6ENSDARG0000004192361


Protein motifs (from Interpro)
Interpro ID Name
 IPR000827  CC chemokine, conserved site
 IPR001811  Chemokine interleukin-8-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002548 monocyte chemotaxis IBA
 biological_processGO:0006935 chemotaxis IEA
 biological_processGO:0006954 inflammatory response IBA
 biological_processGO:0006955 immune response IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IBA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0030593 neutrophil chemotaxis IBA
 biological_processGO:0043547 positive regulation of GTPase activity IBA
 biological_processGO:0048247 lymphocyte chemotaxis IBA
 biological_processGO:0070098 chemokine-mediated signaling pathway IBA
 biological_processGO:0070374 positive regulation of ERK1 and ERK2 cascade IBA
 biological_processGO:0071346 cellular response to interferon-gamma IBA
 biological_processGO:0071347 cellular response to interleukin-1 IBA
 biological_processGO:0071356 cellular response to tumor necrosis factor IBA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005615 extracellular space IBA
 molecular_functionGO:0005125 cytokine activity IEA
 molecular_functionGO:0008009 chemokine activity IBA
 molecular_functionGO:0048020 CCR chemokine receptor binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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