ENSDARG00000042188


Danio rerio

Features
Gene ID: ENSDARG00000042188
  
Biological name :ttc38
  
Synonyms : tetratricopeptide repeat domain 38 / ttc38
  
Possible biological names infered from orthology : A3KMP2 / Q5R3I4
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 10926197
Gene end: 10959429
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000150382
Ensembl peptide - ENSDARP00000101476
Ensembl peptide - ENSDARP00000061837
NCBI entrez gene - 553728     See in Manteia.
RefSeq - NM_001020699
RefSeq - XM_005159026
RefSeq Peptide - NP_001018535
swissprot - F1R9P3
swissprot - F1QRA6
ZFIN ID - ZDB-GENE-050522-318
Ensembl - ENSDARG00000042188
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TTC38ENSGALG00000014551Gallus gallus
 TTC38ENSG00000075234Homo sapiens
 Ttc38ENSMUSG00000035944Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR033891  Tetratricopeptide repeat protein 38


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr