ENSDARG00000042492


Danio rerio

Features
Gene ID: ENSDARG00000042492
  
Biological name :si:dkey-250d21.1
  
Synonyms : si:dkey-250d21.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 32066355
Gene end: 32072789
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000062310
Ensembl peptide - ENSDARP00000110858
swissprot - E7EYR8
swissprot - F1QRG5
ZFIN ID - ZDB-GENE-030131-8276
Ensembl - ENSDARG00000042492
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
thap12a / THAP domain containing 12a / THAP12* / O43422* / Q9CUX1* / THAP domain containing 12*ENSDARG000000424891
thap12b / THAP domain containing 12b / THAP12* / O43422* / Q9CUX1* / THAP domain containing 12*ENSDARG000000209641


Protein motifs (from Interpro)
Interpro ID Name
 IPR006612  THAP-type zinc finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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