ENSDARG00000042548


Danio rerio

Features
Gene ID: ENSDARG00000042548
  
Biological name :tpd52l1
  
Synonyms : tpd52l1 / tumor protein D52-like 1
  
Possible biological names infered from orthology : O54818 / Q16890
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 39691793
Gene end: 39735987
  
Corresponding Affymetrix probe sets: Dr.10145.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000122337
Ensembl peptide - ENSDARP00000091823
Ensembl peptide - ENSDARP00000062401
NCBI entrez gene - 553769     See in Manteia.
RefSeq - NM_001020734
RefSeq - XM_005160820
RefSeq Peptide - NP_001018570
swissprot - F1QTZ8
swissprot - F1QGE3
swissprot - Q503Z0
ZFIN ID - ZDB-GENE-050522-121
Ensembl - ENSDARG00000042548
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q9I8F4ENSGALG00000014843Gallus gallus
 Q16890ENSG00000111907Homo sapiens
 O54818ENSMUSG00000000296Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tpd52l2b / tumor protein D52-like 2b / Q96J77* / Q9CYZ2* / O43399* / TPD52L3* / TPD52L2* / Trpd52l3* / tumor protein D52 like 2* / tumor protein D52 like 3*ENSDARG0000001365546
tpd52 / tumor protein D52 / P55327* / Q62393* / AC036214.3*ENSDARG0000006171342
tpd52l2a / tumor protein D52-like 2a / Q96J77* / Q9CYZ2* / O43399* / TPD52L3* / TPD52L2* / Trpd52l3* / tumor protein D52 like 2* / tumor protein D52 like 3*ENSDARG0000002715440


Protein motifs (from Interpro)
Interpro ID Name
 IPR007327  Tumour protein D52
 IPR013757  Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr