ENSDARG00000042727


Danio rerio

Features
Gene ID: ENSDARG00000042727
  
Biological name :exo5
  
Synonyms : exo5 / exonuclease 5 / F1Q514
  
Possible biological names infered from orthology : Exonuclease V / Q9CXP9 / Q9H790
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 25084821
Gene end: 25094026
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000062694
Ensembl peptide - ENSDARP00000105428
Ensembl peptide - ENSDARP00000124831
NCBI entrez gene - 641427     See in Manteia.
RefSeq - NM_001037413
RefSeq Peptide - NP_001032490
swissprot - F1Q514
swissprot - Q32PM0
ZFIN ID - ZDB-GENE-051113-108
Ensembl - ENSDARG00000042727
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EXO5ENSG00000164002Homo sapiens
 Exo5ENSMUSG00000028629Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019190  Exonuclease V


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006259 DNA metabolic process IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0036297 interstrand cross-link repair ISS
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISS
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004527 exonuclease activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0045145 single-stranded DNA 5"-3" exodeoxyribonuclease activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051536 iron-sulfur cluster binding IEA
 molecular_functionGO:0051539 4 iron, 4 sulfur cluster binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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