ENSDARG00000042933


Danio rerio

Features
Gene ID: ENSDARG00000042933
  
Biological name :bloc1s6
  
Synonyms : biogenesis of lysosomal organelles complex-1, subunit 6, pallidin / bloc1s6
  
Possible biological names infered from orthology : biogenesis of lysosomal organelles complex 1 subunit 6 / Biosis of lysosome-related organelles complex 1 subunit 6 / Q9R0C0 / Q9UL45
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 5506025
Gene end: 5509616
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000122569
NCBI entrez gene - 791215     See in Manteia.
RefSeq - NM_001080697
RefSeq Peptide - NP_001074166
swissprot - E9QGH2
ZFIN ID - ZDB-GENE-070112-1862
Ensembl - ENSDARG00000042933
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BLOC1S6ENSGALG00000040735Gallus gallus
 Q9UL45ENSG00000104164Homo sapiens
 Q9R0C0ENSMUSG00000005804Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR017242  BLOC-1 complex, pallidin subunit
 IPR028119  Snapin/Pallidin/Snn1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0046907 intracellular transport IBA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 cellular_componentGO:0030133 transport vesicle IBA
 cellular_componentGO:0031083 BLOC-1 complex IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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