ENSDARG00000042940


Danio rerio

Features
Gene ID: ENSDARG00000042940
  
Biological name :nab1a
  
Synonyms : nab1a / NGFI-A binding protein 1a (EGR1 binding protein 1)
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 22
Strand: -1
Band:
Gene start: 12870275
Gene end: 12890921
  
Corresponding Affymetrix probe sets: Dr.14078.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000117441
NCBI entrez gene - 565795     See in Manteia.
RefSeq - NM_001045086
RefSeq Peptide - NP_001038551
swissprot - Q1LWI4
ZFIN ID - ZDB-GENE-050208-574
Ensembl - ENSDARG00000042940
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nab1b / NGFI-A binding protein 1b (EGR1 binding protein 1) / NAB1* / Q61122* / Q13506* / NGFI-A binding protein 1*ENSDARG0000004070061
nab2 / NGFI-A binding protein 2 (EGR1 binding protein 2) / Q15742* / NGFI-A binding protein 2*ENSDARG0000007807635


Protein motifs (from Interpro)
Interpro ID Name
 IPR006986  Nab1, C-terminal
 IPR006988  Nab, N-terminal
 IPR006989  NAB co-repressor, domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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