ENSDARG00000042972


Danio rerio

Features
Gene ID: ENSDARG00000042972
  
Biological name :zgc:136605
  
Synonyms : zgc:136605
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 22955262
Gene end: 22959401
  
Corresponding Affymetrix probe sets: Dr.14696.1.A1_at (Zebrafish Array)   NM_001039835_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000090684
Ensembl peptide - ENSDARP00000154494
NCBI entrez gene - 664695     See in Manteia.
RefSeq - NM_001039835
RefSeq Peptide - NP_001034924
swissprot - Q29RF3
ZFIN ID - ZDB-GENE-060312-11
Ensembl - ENSDARG00000042972
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
plp2 / proteolipid protein 2 / Q9R1Q7* / Gm6169* / Q04941* / predicted gene 6169*ENSDARG0000003663034
cmtm3 / CKLF-like MARVEL transmembrane domain containing 3 / Q96MX0* / Q99LJ5* / CKLF-like MARVEL transmembrane domain-containing protein 3 *ENSDARG0000000881124


Protein motifs (from Interpro)
Interpro ID Name
 IPR008253  Marvel domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005789 endoplasmic reticulum membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr