ENSDARG00000043359


Danio rerio

Features
Gene ID: ENSDARG00000043359
  
Biological name :rmnd5b
  
Synonyms : required for meiotic nuclear division 5 homolog B / rmnd5b
  
Possible biological names infered from orthology : B / Q91YQ7 / Q96G75
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 49220026
Gene end: 49245819
  
Corresponding Affymetrix probe sets: Dr.12792.1.A1_at (Zebrafish Array)   Dr.8506.3.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000105253
Ensembl peptide - ENSDARP00000139370
Ensembl peptide - ENSDARP00000138691
Ensembl peptide - ENSDARP00000063642
NCBI entrez gene - 393747     See in Manteia.
swissprot - A0A0R4IVJ7
swissprot - A0A0R4IQK0
swissprot - F6P781
swissprot - Q6PBS0
ZFIN ID - ZDB-GENE-040426-1744
Ensembl - ENSDARG00000043359
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q96G75ENSG00000145916Homo sapiens
 B ENSMUSG00000001054Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006594  LIS1 homology motif
 IPR006595  CTLH, C-terminal LisH motif
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013144  CRA domain
 IPR024964  CTLH/CRA C-terminal to LisH motif domain
 IPR027370  RING-type zinc-finger, LisH dimerisation motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0034657 GID complex IBA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr