ENSDARG00000043928


Danio rerio

Features
Gene ID: ENSDARG00000043928
  
Biological name :gpn1
  
Synonyms : gpn1 / GPN-loop GTPase 1
  
Possible biological names infered from orthology : Q8VCE2 / Q9HCN4
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 12658411
Gene end: 12675267
  
Corresponding Affymetrix probe sets: Dr.14823.1.S1_a_at (Zebrafish Array)   Dr.26377.1.A1_at (Zebrafish Array)   NM_001003633_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000121489
NCBI entrez gene - 445239     See in Manteia.
RefSeq - NM_001003633
RefSeq Peptide - NP_001003633
swissprot - F1R8Z3
ZFIN ID - ZDB-GENE-040801-154
Ensembl - ENSDARG00000043928
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GPN1ENSGALG00000016505Gallus gallus
 GPN1ENSG00000198522Homo sapiens
 Gpn1ENSMUSG00000064037Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003593  AAA+ ATPase domain
 IPR004130  GPN-loop GTPase
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030230  GPN-loop GTPase 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0044376 obsolete RNA polymerase II complex import to nucleus IBA
 biological_processGO:1990022 obsolete RNA polymerase III complex import into nucleus IBA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0003924 GTPase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr