ENSDARG00000044812


Danio rerio

Features
Gene ID: ENSDARG00000044812
  
Biological name :ttc17
  
Synonyms : E7F211 / tetratricopeptide repeat domain 17 / ttc17
  
Possible biological names infered from orthology : E9PVB5 / Q96AE7
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 50295715
Gene end: 50349430
  
Corresponding Affymetrix probe sets: Dr.25897.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000065863
NCBI entrez gene - 569538     See in Manteia.
swissprot - E7F211
ZFIN ID - ZDB-GENE-100422-15
Ensembl - ENSDARG00000044812
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000039558Gallus gallus
 TTC17ENSG00000052841Homo sapiens
 Ttc17ENSMUSG00000027194Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR013105  Tetratricopeptide repeat 2
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0030041 actin filament polymerization IMP
 biological_processGO:0044782 cilium organization IMP
 biological_processGO:0061371 determination of heart left/right asymmetry IMP
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0015629 actin cytoskeleton ISS
 cellular_componentGO:0016020 membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain malformed , abnormal
brain necrotic , abnormal
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 ZFA:0000107 eye eye malformed , abnormal
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 ZFA:0000114 heart heart mislocalised , abnormal
heart edematous , abnormal
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 ZFA:0001058 caudal fin caudal fin curved , abnormal
Show

 ZFA:0001094 whole organism whole organism curved , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr