ENSDARG00000045514


Danio rerio

Features
Gene ID: ENSDARG00000045514
  
Biological name :atp5f1c
  
Synonyms : atp5f1c / ATP synthase F1 subunit gamma
  
Possible biological names infered from orthology : Atp5c1 / ATP synthase subunit gamma, mitochondrial / P36542 / Q91VR2
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 25173299
Gene end: 25181552
  
Corresponding Affymetrix probe sets: Dr.4174.1.S1_at (Zebrafish Array)   NM_200041_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000066929
NCBI entrez gene - 336957     See in Manteia.
RefSeq - NM_001328550
RefSeq - NM_200041
RefSeq Peptide - NP_001315479
RefSeq Peptide - NP_956335
swissprot - Q5RH26
ZFIN ID - ZDB-GENE-030131-8901
Ensembl - ENSDARG00000045514
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ATP5C1ENSGALG00000006753Gallus gallus
 P36542ENSG00000165629Homo sapiens
 Atp5c1ENSMUSG00000025781Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000131  ATP synthase, F1 complex, gamma subunit
 IPR023632  ATP synthase, F1 complex, gamma subunit conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006754 ATP biosynthetic process IEA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0015986 ATP synthesis coupled proton transport IEA
 biological_processGO:0099132 ATP hydrolysis coupled cation transmembrane transport IEA
 cellular_componentGO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEA
 molecular_functionGO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEA


Pathways (from Reactome)
Pathway description
Formation of ATP by chemiosmotic coupling
Cristae formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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