ENSDARG00000045574


Danio rerio

Features
Gene ID: ENSDARG00000045574
  
Biological name :lrmp
  
Synonyms : lrmp / lymphoid-restricted membrane protein / Q5RHB5
  
Possible biological names infered from orthology : lymphoid-restricted membrane protein isoform 2 / Q12912
  
Species: Danio rerio
  
Chr. number: 4
Strand: -1
Band:
Gene start: 17252596
Gene end: 17278928
  
Corresponding Affymetrix probe sets: Dr.7639.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000143787
Ensembl peptide - ENSDARP00000116535
Ensembl peptide - ENSDARP00000118448
Ensembl peptide - ENSDARP00000121715
NCBI entrez gene - 567234     See in Manteia.
RefSeq - NM_001346283
RefSeq - XM_009300317
RefSeq Peptide - NP_001333213
RefSeq Peptide - NP_001333212
swissprot - F1R3P6
swissprot - A0A286Y9C0
swissprot - F1R1K3
swissprot - Q5RHB5
ZFIN ID - ZDB-GENE-041210-152
Ensembl - ENSDARG00000045574
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LRMPENSGALG00000014011Gallus gallus
 LRMPENSG00000118308Homo sapiens
 LrmpENSMUSG00000030263Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mrvi1 / murine retrovirus integration site 1 homolog / Q9WUX5* / Q9Y6F6* / Protein MRVI1 *ENSDARG000000746028
si:ch73-352p18.4ENSDARG000000885845
si:ch211-163l21.11ENSDARG000000958553


Protein motifs (from Interpro)
Interpro ID Name
 IPR008677  MRVI1
 IPR028168  KASH5-like coiled-coil domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007052 mitotic spindle organization IMP
 biological_processGO:0007338 single fertilization IEA
 biological_processGO:0007344 pronuclear fusion IMP
 biological_processGO:0035046 pronuclear migration IMP
 biological_processGO:0051028 mRNA transport IMP
 biological_processGO:0051984 positive regulation of chromosome segregation IMP
 cellular_componentGO:0000785 chromatin IDA
 cellular_componentGO:0000922 spindle pole IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope IEA
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031965 nuclear membrane IDA
 cellular_componentGO:0072686 mitotic spindle IDA
 cellular_componentGO:0097431 mitotic spindle pole IDA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000093 blastomere blastomere female pronucleus misaligned with blastomere aster, abnormal
blastomere female pronucleus movement quality , abnormal
blastomere centrosome detached from blastomere male pronucleus, abnormal
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 ZFA:0001176 blastoderm blastoderm cleavage furrow malformed , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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