ENSDARG00000045601


Danio rerio

Features
Gene ID: ENSDARG00000045601
  
Biological name :cax1
  
Synonyms : cation/H+ exchanger protein 1 / cax1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 4
Strand: 1
Band:
Gene start: 14981854
Gene end: 14990926
  
Corresponding Affymetrix probe sets: Dr.7700.1.A1_at (Zebrafish Array)   NM_001025507_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000067045
NCBI entrez gene - 560283     See in Manteia.
RefSeq - NM_001025507
RefSeq Peptide - NP_001020678
swissprot - Q5RH62
ZFIN ID - ZDB-GENE-030131-3044
Ensembl - ENSDARG00000045601
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000036140Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cax2 / cation/H+ exchanger protein 2ENSDARG0000001573265


Protein motifs (from Interpro)
Interpro ID Name
 IPR004837  Sodium/calcium exchanger membrane region
 IPR005185  Inner membrane component domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006816 calcium ion transport IDA
 biological_processGO:0014032 neural crest cell development IMP
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0012505 endomembrane system IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001399 palatoquadrate cartilage palatoquadrate cartilage decreased size , abnormal
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 ZFA:0001613 pharyngeal arch 3-7 pharyngeal arch 3-7 decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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