ENSDARG00000045824


Danio rerio

Features
Gene ID: ENSDARG00000045824
  
Biological name :zgc:101783
  
Synonyms : zgc:101783
  
Possible biological names infered from orthology : FAM3D / family with sequence similarity 3 member D / Oit1 / oncoprotein induced transcript 1 / P97805 / Q96BQ1
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 19733704
Gene end: 19752145
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000067353
Ensembl peptide - ENSDARP00000067352
Ensembl peptide - ENSDARP00000119689
Ensembl peptide - ENSDARP00000117849
Ensembl peptide - ENSDARP00000114821
NCBI entrez gene - 100002706     See in Manteia.
NCBI entrez gene - 447883     See in Manteia.
RefSeq - NM_001004622
RefSeq Peptide - NP_001004622
swissprot - E9QDY1
swissprot - E7EXX9
swissprot - F1R0K5
swissprot - E9QEF2
swissprot - E9QDZ6
ZFIN ID - ZDB-GENE-040912-48
Ensembl - ENSDARG00000045824
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FAM3DENSGALG00000007152Gallus gallus
 FAM3DENSG00000198643Homo sapiens
 Oit1ENSMUSG00000021749Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fam3c / Q7ZYY4 / family with sequence similarity 3, member C / Q92520* / Q91VU0* / Protein FAM3C *ENSDARG0000005615242
fam3a / family with sequence similarity 3, member A / P98173* / Q9D8T0* / Protein FAM3A *ENSDARG0000007067535
si:dkeyp-67f1.2ENSDARG0000009162524


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030155 regulation of cell adhesion IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr