ENSDARG00000046157


Danio rerio

Features
Gene ID: ENSDARG00000046157
  
Biological name :zgc:114188
  
Synonyms : zgc:114188
  
Possible biological names infered from orthology : P63276 / ribosomal protein S17 / Rps17
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 192116
Gene end: 196950
  
Corresponding Affymetrix probe sets: Dr.664.3.S1_at (Zebrafish Array)   NM_001013455_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000127775
NCBI entrez gene - 541327     See in Manteia.
RefSeq - NM_001013455
RefSeq Peptide - NP_001013473
swissprot - Q5BJA1
swissprot - X1WD52
ZFIN ID - ZDB-GENE-050320-15
Ensembl - ENSDARG00000046157
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RPS17ENSGALG00000002157Gallus gallus
 Rps17ENSMUSG00000061787Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rps17 / ribosomal protein S17 / P63276*ENSDARG0000010401193


Protein motifs (from Interpro)
Interpro ID Name
 IPR001210  Ribosomal protein S17e
 IPR018273  Ribosomal protein S17e, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000028 ribosomal small subunit assembly IBA
 biological_processGO:0006412 translation IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0022627 cytosolic small ribosomal subunit IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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