ENSDARG00000051754


Danio rerio

Features
Gene ID: ENSDARG00000051754
  
Biological name :rpgrip1l
  
Synonyms : rpgrip1l / RPGRIP1-like
  
Possible biological names infered from orthology : Q68CZ1 / Q8CG73
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 36045072
Gene end: 36086409
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000107198
Ensembl peptide - ENSDARP00000148313
NCBI entrez gene - 557688     See in Manteia.
swissprot - E7F4E7
ZFIN ID - ZDB-GENE-081104-81
Ensembl - ENSDARG00000051754
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000003602Gallus gallus
 Q68CZ1ENSG00000103494Homo sapiens
 Q8CG73ENSMUSG00000033282Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rpgrip1 / RPGR interacting protein 1 / Q96KN7* / Q9EPQ2* / retinitis pigmentosa GTPase regulator interacting protein 1*ENSDARG0000007605531


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR021656  RPGR-interacting protein 1, first C2 domain
 IPR031139  RPGRIP1 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009880 embryonic pattern specification IMP


Pathways (from Reactome)
Pathway description
Hedgehog off state
Anchoring of the basal body to the plasma membrane
Hedgehog on state


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000135 notochord notochord kinked , abnormal
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 ZFA:0000155 somite somite decreased length , abnormal
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 ZFA:0001094 whole organism whole organism decreased length , abnormal
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 ZFA:0001114 head head decreased size , abnormal
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 ZFA:0001115 trunk trunk increased width , abnormal
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 ZFA:0001117 post-vent region post-vent region curved dorsal , abnormal
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 ZFA:0001678 immature eye immature eye decreased size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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