ENSDARG00000052124


Danio rerio

Features
Gene ID: ENSDARG00000052124
  
Biological name :accs
  
Synonyms : 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) / accs
  
Possible biological names infered from orthology : 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) / 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) like / 1-aminocyclopropane-1-carboxylate synthase (non-functional) / 1-aminocyclopropane-1-carboxylate synthase (non-functional)-like / A2AIG8 / ACCSL / Q3UX83 / Q4AC99 / Q96QU6
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 8921425
Gene end: 8949639
  
Corresponding Affymetrix probe sets: Dr.346.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000068404
Ensembl peptide - ENSDARP00000106346
NCBI entrez gene - 541510     See in Manteia.
RefSeq - XM_005162977
swissprot - F1QMK2
swissprot - F1QN24
ZFIN ID - ZDB-GENE-050327-39
Ensembl - ENSDARG00000052124
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000033730Gallus gallus
 ACCSENSG00000110455Homo sapiens
 ACCSLENSG00000205126Homo sapiens
 AccsENSMUSG00000040272Mus musculus
 AccslENSMUSG00000075023Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004838  Aminotransferases, class-I, pyridoxal-phosphate-binding site
 IPR004839  Aminotransferase, class I/classII
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009058 biosynthetic process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr