ENSDARG00000052271


Danio rerio

Features
Gene ID: ENSDARG00000052271
  
Biological name :slc22a18
  
Synonyms : slc22a18 / solute carrier family 22, member 18
  
Possible biological names infered from orthology : Q96BI1 / solute carrier family 22 (organic cation transporter), member 18
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 39537790
Gene end: 39552314
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000112647
Ensembl peptide - ENSDARP00000142690
Ensembl peptide - ENSDARP00000120263
NCBI entrez gene - 559752     See in Manteia.
RefSeq - NM_001037385
RefSeq Peptide - NP_001032462
swissprot - E9QD56
swissprot - A0A1D5NS80
swissprot - F1QCN1
ZFIN ID - ZDB-GENE-051120-165
Ensembl - ENSDARG00000052271
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC22A18ENSGALG00000006454Gallus gallus
 Q96BI1ENSG00000110628Homo sapiens
 Slc22a18ENSMUSG00000000154Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mfsd9 / major facilitator superfamily domain containing 9 / Q8C0T7* / Q8NBP5* / Major facilitator superfamily domain-containing protein 9 *ENSDARG0000007472822


Protein motifs (from Interpro)
Interpro ID Name
 IPR001958  Tetracycline resistance protein TetA/multidrug resistance protein MdtG
 IPR011701  Major facilitator superfamily
 IPR020846  Major facilitator superfamily domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005215 transporter activity IEA


Pathways (from Reactome)
Pathway description
Organic cation transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr