ENSDARG00000052535


Danio rerio

Features
Gene ID: ENSDARG00000052535
  
Biological name :ubxn10
  
Synonyms : Q0P3Z8 / UBX domain protein 10 / ubxn10
  
Possible biological names infered from orthology : Q8BG34 / Q96LJ8
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 37090889
Gene end: 37094205
  
Corresponding Affymetrix probe sets: Dr.14964.1.A1_at (Zebrafish Array)   NM_001045446_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000068895
NCBI entrez gene - 751736     See in Manteia.
RefSeq - NM_001045446
RefSeq Peptide - NP_001038911
swissprot - Q0P3Z8
ZFIN ID - ZDB-GENE-060825-319
Ensembl - ENSDARG00000052535
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBXN10ENSGALG00000023708Gallus gallus
 Q96LJ8ENSG00000162543Homo sapiens
 Q8BG34ENSMUSG00000043621Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001012  UBX domain
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0060271 cilium assembly ISS
 biological_processGO:0061371 determination of heart left/right asymmetry IMP
 cellular_componentGO:0005929 cilium ISS
 cellular_componentGO:0030992 intraciliary transport particle B ISS
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000360 heart tube heart tube mislocalised , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr