ENSDARG00000052978


Danio rerio

Features
Gene ID: ENSDARG00000052978
  
Biological name :mbnl1
  
Synonyms : mbnl1 / muscleblind-like splicing regulator 1
  
Possible biological names infered from orthology : Muscleblind-like protein 1 / Q9JKP5 / Q9NR56
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 47708853
Gene end: 47829287
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000088834
Ensembl peptide - ENSDARP00000151242
Ensembl peptide - ENSDARP00000147380
Ensembl peptide - ENSDARP00000124958
Ensembl peptide - ENSDARP00000123902
Ensembl peptide - ENSDARP00000110123
Ensembl peptide - ENSDARP00000069410
Ensembl peptide - ENSDARP00000069415
NCBI entrez gene - 767696     See in Manteia.
RefSeq - NM_001100050
RefSeq Peptide - NP_001093520
swissprot - A9UH06
swissprot - A9UH05
swissprot - A5YC47
swissprot - F8W4K9
swissprot - F8W5V9
swissprot - Q08BY7
swissprot - E7FD07
swissprot - E7FD06
ZFIN ID - ZDB-GENE-060929-704
Ensembl - ENSDARG00000052978
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MBNL1ENSGALG00000029190Gallus gallus
 MBNL1ENSG00000152601Homo sapiens
 Mbnl1ENSMUSG00000027763Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mbnl2 / muscleblind-like splicing regulator 2 / Q5VZF2* / Q8C181* / Muscleblind-like protein 2 *ENSDARG0000001846053
mbnl3 / muscleblind-like splicing regulator 3 / Q8R003* / Q9NUK0* / muscleblind like splicing factor 3*ENSDARG0000001608550


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr