ENSDARG00000053370


Danio rerio

Features
Gene ID: ENSDARG00000053370
  
Biological name :eif3jb
  
Synonyms : eif3jb / eukaryotic translation initiation factor 3, subunit Jb
  
Possible biological names infered from orthology : EIF3J / Eif3j1 / Eif3j2 / eukaryotic translation initiation factor 3 subunit J / Eukaryotic translation initiation factor 3 subunit J-A / Eukaryotic translation initiation factor 3 subunit J-B / O75822 / Q3UGC7 / Q66JS6
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 31425976
Gene end: 31432103
  
Corresponding Affymetrix probe sets: Dr.16682.1.S1_at (Zebrafish Array)   NM_213502_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000069883
NCBI entrez gene - 406823     See in Manteia.
RefSeq - NM_213502
RefSeq Peptide - NP_998667
swissprot - F1Q774
ZFIN ID - ZDB-GENE-040426-2900
Ensembl - ENSDARG00000053370
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 EIF3JENSGALG00000008187Gallus gallus
 EIF3JENSG00000104131Homo sapiens
 Eif3j1ENSMUSG00000027236Mus musculus
 Eif3j2ENSMUSG00000043424Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
eif3ja / eukaryotic translation initiation factor 3, subunit Ja / EIF3J* / Eif3j2* / O75822* / Q3UGC7* / Q66JS6* / Eif3j1* / eukaryotic translation initiation factor 3 subunit J* / Eukaryot...ENSDARG0000001260362
CU694372.1 / EIF3J* / Q66JS6* / Eif3j1* / Eif3j2* / O75822* / Q3UGC7* / eukaryotic translation initiation factor 3 subunit J* / Eukaryotic translation initiation factor 3 subunit J-A * / Eu...ENSDARG0000009798852


Protein motifs (from Interpro)
Interpro ID Name
 IPR013906  Eukaryotic translation initiation factor 3 subunit J
 IPR023194  Eukaryotic translation initiation factor 3-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001732 formation of cytoplasmic translation initiation complex IEA
 biological_processGO:0002183 cytoplasmic translational initiation IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005852 eukaryotic translation initiation factor 3 complex IEA
 cellular_componentGO:0016282 eukaryotic 43S preinitiation complex IEA
 cellular_componentGO:0033290 eukaryotic 48S preinitiation complex IEA
 molecular_functionGO:0003743 translation initiation factor activity IEA


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Translation initiation complex formation
Formation of a pool of free 40S subunits
Formation of the ternary complex, and subsequently, the 43S complex
Ribosomal scanning and start codon recognition
GTP hydrolysis and joining of the 60S ribosomal subunit


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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