ENSDARG00000053452


Danio rerio

Features
Gene ID: ENSDARG00000053452
  
Biological name :pop5
  
Synonyms : pop5 / POP5 homolog, ribonuclease P/MRP subunit / Q5BJI6
  
Possible biological names infered from orthology : Q969H6 / Q9DB28 / Ribonuclease P/MRP protein subunit POP5
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 41274211
Gene end: 41279326
  
Corresponding Affymetrix probe sets: Dr.3957.1.S1_at (Zebrafish Array)   NM_001013548_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000069973
NCBI entrez gene - 541421     See in Manteia.
RefSeq - NM_001013548
RefSeq Peptide - NP_001013566
swissprot - Q5BJI6
ZFIN ID - ZDB-GENE-050320-123
Ensembl - ENSDARG00000053452
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POP5ENSGALG00000007124Gallus gallus
 POP5ENSG00000167272Homo sapiens
 Pop5ENSMUSG00000060152Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002759  Ribonuclease P/MRP protein subunit
 IPR016819  Ribonuclease P/MRP protein subunit Pop5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0009249 protein lipoylation IBA
 biological_processGO:0016070 RNA metabolic process IEA
 biological_processGO:0090501 RNA phosphodiester bond hydrolysis IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0004526 ribonuclease P activity IEA
 molecular_functionGO:0004540 ribonuclease activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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